Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVPTVVIDLVDQLKGNYSIKLI-------------LEVLNIPKSTYYRWKNKTYKNDTVTQKVIELCEANHY----TYGYRKITALINQCYTSPINHKRVQRMMQKHHLNCRVRPKKTTRIGKPYYKTDNLLQR
5BP5 Chain:C ((12-91))
--------------GNYNIKSIFSGSLYLNPVSKSLTFSNESSANNQKW-NVEYMAENRCFKISNVAEPNKYLSYDNFGFISLDSLSNRCYWFPI---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
5BP5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8798 for 296 contacts (-29.7/contact) +
2D Compatibility (PS) -6614 + (NN) 1543 + (LL) 4176
1D Compatibility (HY) -3200 + (ID) 1100
Total energy: -13993.0 ( -47.27 by residue)
QMean score : 0.064
(partial model without unconserved sides chains):
PDB file :
Tito_5BP5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5BP5-query.scw
PDB file :
Tito_Scwrl_5BP5.pdb
: