Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MSVLKWVSSYNNERDAWFVLYPP-----SKASSCFTLIVDVALFSE
1T0F Chain:C ((4-52))
IKVVKPSDWDSLPDTDLRYIYSQRQPEKTMHERLKGKGVIVDMASLFKQ
General information:
TITO was launched using:
RESULT:
Template:
1T0F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5192 for 190 contacts (-27.3/contact) +
2D Compatibility (PS) -4004 + (NN) 1255 + (LL) 0
1D Compatibility (HY) 1200 + (ID) 250
Total energy: -6991.0 ( -36.79 by residue)
QMean score : -0.139
(partial model without unconserved sides chains):
PDB file :
Tito_1T0F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T0F-query.scw
PDB file :
Tito_Scwrl_1T0F.pdb
: