Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEEILREVADIFIGDDRDSIYDYKTGNELVRFFNHYFNKGDIYQAPFPSRWLYVVKHLQTLIQERKINQFFTLILSNHYIKYELKIDEVEAAKQAAKALKLFNKRLNHYGYYITGTNNARYFMDKDEDTESIGYGGYANIY--LQKSTGLAVKKLKEEYL-TDSSIKSRFKREFDLTKSFDTNPLFINVFEF--NESDYSYTMELADETLKDYIESKTIS-----ELEKVKII-MKILKAMSQAHSENKIHRDISSKNVLM-FRGKVKISDLGLGKNLDEIHSHQTFDTNGVGQYKYCAPEQMYSLKQADKQSDVFSLGRLINFIMTGNVVNNHHLFRGVSDKATNSSKEYRFEDANEMLKMLQRILEYHSSAKHVEKCQEKLKRGVFDDESEEFIMTRSDEQLCQMVLSSNNNEQACLIRYMQKNESSACDLIESINRKYQEFCGRFEDYDPFAKLAYMILCNNFSYRVNETAARVLNYVAWSVNRFSAQDLIKGLINRGVEPLIEEKLKDN |
| 4KRC Chain:A ((11-215)) | ----------------------------------------------------------------------------------------------------------------------------------EKLGNGTYATVYKGLNKTTGVYVA-LKEVKLDSEEGTPSTAIREISLMKELKHENI-VRLYDVIHTENKLTLVFEFMDNDLKKYMDSR---TPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGI--PVNTFSSEVVTLW-YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKP-----LFPGTNDE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KRC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35757 for 1375 contacts (-26.0/contact) +
2D Compatibility (PS) -20240 + (NN) -6548 + (LL) 23576
1D Compatibility (HY) -18800 + (ID) 2950
Total energy: -60719.0 ( -44.16 by residue)
QMean score : 0.339
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