Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMCKLEWDDEINFGKISFLSHSHIPDRKTGLELAEKYGIDGVMIGSGIFHNPFAFEKEPREHTSKELLDLLRLHLSLFNKYEKDEIRQFKSLRRFFKIYVRGIRALANFDIN
4FBW Chain:A ((34-103))
-------------GNDSFVSFNEI------LEIARERDVDMILLGGDIFH-----DNKPSRKALYQALRSLRLN--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4FBW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13922 for 243 contacts (-57.3/contact) +
2D Compatibility (PS) -5697 + (NN) -5787 + (LL) 4504
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -25802.0 ( -106.18 by residue)
QMean score : 0.240
(partial model without unconserved sides chains):
PDB file :
Tito_4FBW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FBW-query.scw
PDB file :
Tito_Scwrl_4FBW.pdb
: