Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNDMLISLVIPVFAL-----LVIGG-----IIWVIIEGIVHISKKNKAI-----DNFLNQVNKVSETYKFATAFLFLILATAGISQFYLYYIVSAFLFWLVILTFGIAGIIFLMPYGLCFLPLYKQKKKKQTFKKYMVYTTIGLSICLGLSLVLVHTTKIYMDEGGVRYYYGSFVMKQAGGYAYLALAVLSTLLIVAKKATNKNKEIETVDNTNITER---------- |
| 1K6D Chain:A ((1-219)) | MKTKLMTLQDATGFFRDGMTIMVGGFMGIGTPSRLVEALLESGVRDLTLIANDTAFVDTGIGPLIVNGRVRKVIASHIGTNPETGRRMISGEMDVVLVPQGTLIEQIRCGGAGLGGFLTPTGVGTVEGKQTLTLDGKTWLLERP---LRADLALIRAHRCDTL--------GNLTYQLSARNFNPLIALAADITLVEPDELVETGELQPDHIVTPGAVIDHIIVSQES |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185056 for 1433 contacts (-129.1/contact) +
2D Compatibility (PS) -19452 + (NN) 8688 + (LL) 560
1D Compatibility (HY) 3600 + (ID) 950
Total energy: -192610.0 ( -134.41 by residue)
QMean score : 0.152
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