Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKRVNKLVLGISFLFLIISIFAGCGTG----KEAEIKKSFEKTLSMYPIKNLEDLYDKEGYRDDQ-------FDKNDKGTWIVRSSMSIQSNGKDMNIKGMVLYMNRNTRTTNGYYYVDVIEREDKGIHRDNEKRYPVKMVDNKIIPTKEIKDEKIKKEIENFKFFVQ--YGDFKDLSKYKDGDISYNPEVPSYSAKYQLTNDDYNVKQLRKRYNIPTNKAPKLLLKGTGNLKGSSIGYKKIEFTFVEKKGENIYFSDGLHFNPSEDK |
| 3TD7 Chain:A ((35-295)) | -HNGLITKIWGTAGWTFNHAVTFGYPLNPTSDDKRRYKNYFISLGDVLPCRLCRESYKKFITTGKTALTNEVLRNRHTLTKWFYDVHNAVNNKLEVDYGLSYEDVVNKYESFRAKCGKVTPLDHKAFSFKKLYYMDAPIVSLDKVENFVRIARMRGISDKYFAFLELATVLNGDFNELKK--QSSWEYRNKYAQKKIRHMRENAIPSIEEQGYWKGTPTIDELKLLLFLASNL----------NRTEVNDAINNVERLESTHYIEN--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TD7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 53346 for 1641 contacts (32.5/contact) +
2D Compatibility (PS) -24889 + (NN) -1898 + (LL) 748
1D Compatibility (HY) -1600 + (ID) 1650
Total energy: 24057.0 ( 14.66 by residue)
QMean score : 0.104
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