Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------MKRLNK-LVLGISFLFLVISITAGCGM-----GKEAEI-KKSFEKTMSMYP-IKNLEDLYDK-EGYRDDQFDKNDKGTWIVNSQ-----------MAIQNKGEPMKSKGMVLYMNRNTRTT----NGYYYVNVIKGEDKGK---------HQDNEKRYPVKMVD-NKIILTKEIKDE-NIKI-EIENFKFFVQYGNFKDLENYKDGDISYNPEVPSYSAKYQLTNDDYNVKQLRKRYDIPTNKAPKLLLKGTGNLKGSSVGYKDI----------EFTFVEKKEENIYFSDGLIFKPSEDK------- |
| 1T9K Chain:A ((5-344)) | LKTKTMEWSGNSLKLLDQRKLPFIEEYVECKTHEEVAHAIKEMIVRGAPAIGVAAAFGYVLGLRDYKTGSLTDWMKQVKETLARTRPTAVNLFWALNRMEKVFFENADRENLFEILENEALKMAYEDIEVNKAIGKNGAQLIKDGSTILTHCNAGALATVDYGTALGVIRAAVESGKRIRVFADETRPYLQGARLTAWELMKDGIEVYVITDNMAGWLMKRGLIDAVVVGAD----RIALNGDTANKIGTYSLAVLAKRNNIPFYVAAPVSTIDPTIRSGEEIPIEERRPEEVTHCGGNRIAPEGVKVLNPAFDVTENTLITAIITEKGVIRPPFEENIKKILE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 51180 for 2031 contacts (25.2/contact) +
2D Compatibility (PS) -26762 + (NN) -9482 + (LL) 296
1D Compatibility (HY) 2000 + (ID) 1750
Total energy: 15482.0 ( 7.62 by residue)
QMean score : 0.179
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