Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMIGSSFIPLQRVLMYFINPNDSMDQFTLEVLRLPRITLAILAGAALGMSGLMLQNVLKN-PIASPDIIGITGGASLSAVVFIAFFSHLTIHLLPLFAVLGGAVAMMILLVFQTKGQ------IRPTILIIIGISMQTLFIALVQGLLIT-TKQLSAAKAYTWLVGSLYGATFKDTIILGMVILAVVPLLFLVIPKMKISILDDPVAIGLGLHVQRMKLIQLITSTILVSMAISLVGNIGFVGLIAPHIAKTIVRGSYAKKLLMSAMIGAISIVIADLIGRTLFLPKEVPAGVFIAAFGAPFFIYLLLTVKKL---- |
| 4CRU Chain:B ((4-273)) | MLEREKIYQWINELSSPETRENALLELSKKRESVPD--LAPMLWHSFGTIAALLQEIVNIYPSINPP--TLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILL----------------------DDTGLAYICQTYERFSHVAMILGKMVLQLSKEPS------ARLLKHVVRCYLRLSDNPRAREALRQC---------------LPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -225364 for 2036 contacts (-110.7/contact) +
2D Compatibility (PS) -26158 + (NN) -1811 + (LL) 5400
1D Compatibility (HY) -2000 + (ID) 2200
Total energy: -252133.0 ( -123.84 by residue)
QMean score : 0.227
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