Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------MLLKPKYQIVIAGLCLAIVAILSLMIGNTLVSPGTVIQALFNFDSENDLHDVVTGARASRTIIALLTGAALAVSGLLMQALTRNPIASPGLFGVNAGAVFFVIFSITFIQIQSFKMIVVIAFLGAIVVTILVVALGMFRQTL--------------FSP-------HRVILAGAAIAMLFTAFTQGILIMNETDLQGLLFWLSGSVSLRNIWDIPWIIPLVLILILIAFSMAAHINILMTSDDIATGLGQNIKLIKWMIIM-LISMLAGISVAVAGSIVFVGLIVPNISK----RLLPPNYKYLIPFTALAGAILMIISDIVARIIIKPLELPIGVVTAVI-------GAIVLIYIMKKGRQRL---------------------- |
| 2X2Z Chain:A ((6-416)) | GNPFQANVEMKTFMERFNLTHHHQSGIYVDLGQDKEVDGTLYREPAGLCPIWGKHIELQQPDRPPYRNNFLEDVPTEKEYKQSGNPLPGG----FNLNFVTPSGQRISPFPMELLENSNIKASTDLGRCAEFAFKTVAMDKNNKATKYRYPFVYDSKKRLCHILYVSMQLMEGKKYCSVKGEPPDLTWYCFKPRKSVTENHHLIYGSAYVGENPDAFISKCPNQALRGYR-FGVWKKG-----RCLDYTELTDTVIERV---ESKAQCWVKTFENDGVASDQPHTYPLTSQASWNDWWPLHQSDQPHSGGVGRNYGFYYVDTTGEGKCALSDQVPDCLVSDSAAVSYTAAGSLSEETPNFIIPSNTPPTPETALQCTADKFPDSFGACDVQACKRQKTSCVGGQIQSTSVDCTADEQNEC |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X2Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -417965 for 2425 contacts (-172.4/contact) +
2D Compatibility (PS) -32042 + (NN) 16948 + (LL) 1080
1D Compatibility (HY) 6000 + (ID) 2250
Total energy: -428229.0 ( -176.59 by residue)
QMean score : 0.103
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