Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNREMLYLNRSDIEQAG-----GNHSQVYVDALTEALTAHAHNDFVQPLKPYLRQDPENGHIADRIIAMPSHIGGEHAISGIKWIGSKHDNPSKRNMERASGVIILNDPETNYPIAVMEASLISSMRTAAVSVIAAKHLAKKGFKDLTIIGCGLIGDKQLQSMLEQFDHIKRVFVYDQFSEACARFVDRWQQQRPEINFIATENAKEAVSNGEVVITCTVTD--QPYIEYDWLQKGAFISNISI-----MDVHKEVFIKADKVVVDDWSQCNREKKTINQLVLEGKFSKEALHAELGQLVTGDIPGREDDDEIILLNPMGMAIEDISSAYFIYQQAQQQNIGTTLNLY |
| 1X7D Chain:A ((2-322)) | ----TYFIDVPTMSDLVHDIGVAPFIGELAAALRDDFKRWQAFD--KSARVASHS------EVGVIELMPVADK---SRYAFKYVNGHPANTA-RNLHTVMAFGVLADVDSGYPVLLSELTIATALRTAATSLMAAQALARPNARKMALIGNGAQSEFQALAFHKHL-GIEEIVAYDTDPLATAKLIANLKEYS-GLTIRRASSVAEAVKGVDIITTVTADKAYATIITPDMLEPGMHLNAVGGDCPGKTELHADVLRNA-RVFVEYEPQTRIE-GEIQQLPA------DFPVVDLWRVLRGETEGRQSDSQVTVFDSVGFALEDYTVLRYVLQQAEKRGMGTKIDL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1X7D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184815 for 2710 contacts (-68.2/contact) +
2D Compatibility (PS) -32523 + (NN) -11577 + (LL) 404
1D Compatibility (HY) -13200 + (ID) 3350
Total energy: -245061.0 ( -90.43 by residue)
QMean score : 0.550
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