Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEKKILILCQYFYPEYVSSATLPTQLAEDLIANHINVDVMCGWPYEYSNHKQVSKTEMHRGIRIRRLKYSRFNNKSKVGRIINFFSLFSKFVINIPKMLKYDQILVYSNPPILPLIPDVLHRLLK-KKYSFVVYDIAPDNAIKTGATRPGSMIDKLMRYINRHVYKNAENVIVLGTEMKNYLLNHQISKNADNIHVIPNWYDMRQLQDNRIYND--TFKAYR-EQYDKILLYSGNMGQLQDMETLISFLKLNKD-QPQTLTILCGHGKKFADVKTAIEDHRI-ENVKMFEFLTGTDYADVLKIADVCIASLIKEGV---GLGVPSKNYGYLAAKKPLVLIMDKQSDIVQHVEQYDAGIQIDNGDAHAIYNFINTH--SSKELHEMGERAHQLFKDKYTREINTMKYYNLLK |
| 3OKP Chain:A ((4-377)) | --SRKTLVVTNDFPPRIGGIQSYLRDFIATQD--PESIVVFASTQNAEE---A-HAYDKTLDYEVIRWPRSVM----L--P----TPTTAHAMAEIIREREIDNVWFGAAAPL-ALMAG-TAKQAGASKVIASTHGHEVGWSM----L---P----GSRQSLRKIGTEVDVLTYISQYTLRRFKSAFGSH--PTFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATD--VSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGT--SGGAPETVTP-ATGLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208366 for 3113 contacts (-66.9/contact) +
2D Compatibility (PS) -38023 + (NN) -5736 + (LL) 1752
1D Compatibility (HY) 400 + (ID) 2300
Total energy: -252273.0 ( -81.04 by residue)
QMean score : 0.416
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