Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MTRPTNNKFILPIITFIIFLGIWEMVIIIGHYQPVLLPG-----PALVGKSIWTFIVTGEIFQHLAISLWRFVAGFVVALLVAIPL----GFLLG---------------------RNRWLYNAIEPLFQLIRPISPIAW----------------APFVVLWFGIGSLPAIAIIFIAA--FFPIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIGAQSGLGFLIVDARNMLNLEDVLAAIFFIGLFGFIIDRFISYIE----QFILRRFGE------------------ |
| 1RHC Chain:A ((1-330)) | MKTQIGYFASLEQYRPMDALEQAIRAEKVG-FDSVWVDDHFHPWYHDNAQSAQAWAWMGAALQATKKVFISTCITCPIMRYNPAIVAQTFATLRQMYPGRVGVAVGAGEAMNEVPVTGEWPSVPVRQDMTVEAVKVMRMLWESDKPVTFKGDYFTLDKAFLYTKPDDEVPLYFSGMGPKGAKLAGMYGDHLMTVAAAPSTLKNVTIPKFEEGAREAGKDPSKMEHAMLIWYSVDPDYDKAVEALRFWAGCL-VPSMFKYKVYDPKEVQLHANLVHCDTIKENYMCATDAEEMIKEIERFKEAGINHFCLGNSSPDVNFGIDIFKEVIPAVRD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -297672 for 1898 contacts (-156.8/contact) +
2D Compatibility (PS) -26243 + (NN) 2049 + (LL) 396
1D Compatibility (HY) -2000 + (ID) 1300
Total energy: -324770.0 ( -171.11 by residue)
QMean score : 0.179
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