Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKVLNIFTIAFKSILKNKGRNIFTMIGIIIGISSVITIMSLGNGFKKTAADQFSDAGAGKQEALISFTFKVDEKIKKYPFNQRDIELVNQVDGVLDAKLKENKEEGIEATITNVQKKSDIFIIKKQNLHSFKVGRGFDKEDNELRKKIVVINDQVAKTVFNNNAIGKSLYIEGQGFEVIGITDKLYSDSSTVIMPENTFNYYMGHLHQGLPTLQIIIEDGYNKKTVVKKVESLLNKKGSGSVLGEYTYTDTEEIIKSIDKIFDSITYFVAAVAGISLFIAGIGVMNVMYISVAERTEEIAIRRAFGAKSRDIELQFLIESILICVTSGFIGLILGVVFATIIDVLTPDYIKSVVSLSSVIIAVSVSILIGLLFGWIPARAASKKELIDIIK |
3P0E Chain:E ((202-270)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FYEGQGRLDGALCSFSREKKLDYLKRAFKAGVRNIEM----ESTVFAAMCGLCGLKAAVVCVTLLDRLDCDQI----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P0E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25804 for 336 contacts (-76.8/contact) +
2D Compatibility (PS) -6908 + (NN) 1904 + (LL) 23904
1D Compatibility (HY) -4000 + (ID) 1150
Total energy: -12054.0 ( -35.88 by residue)
QMean score : -0.065
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