Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIISIAIIVLALVLSGCGVPTKSEVAQKSSKVEVKGERPTIHFLGQASYENDMNIVKDQLENAGFNVKMNIQPDYGSYRTQRQAGNYDIQIDDWMTVFGDPNYAMTALFSSTGSNSLLKDKHVDQLLNKASTQNEADVKQTYKQIEDEVVFDKGYMAPLYGSKKNLVYDNKVLDKNSVGLPNSRALIWQQFDYNNSRERDTRPLVMTQQDGEIPTLDPIRSIAPSVYSINMNMYTRLLLLDENDHLTTKGSLSRDYAVNKDNKAFYFLLRDDDYFAKVVNGQARNTGERVSAEDVKFSLDRARDKKSVPNNNTYNMHKHINDIKILKDEDIDQLRKEKDKDDKSIYDKLIKAYNVKSLTTDGQKVNNKDGIYQIVKITTDQSMPREVNYLTHSSAGILSKKFVNQVNQEYPKGYGDSSTIPANSDGKNALYASGAYIMTQKN-AYQATFQRNPGFNETEKGSYGSPKIKNITLKFNGDPNNALSELRNHSIDMLA-DVNQKHFDLIKSDKNLSIIRKNGRKSVFLMLNIKKGIFKTHPNLRQAVVNAIDQDQFIK-FYRGDKFKIASPITPLVDTGN---------EQRQDLEKVEKAINQ |
| 1JET Chain:A ((10-350)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADKQTLVRNN-GSEVQSLDPHKIEGVPESNVSRDLFEGLLISDVEGHPS--PGVAEKWEN-KDFKVWTFHLRENAKWS---------DGTPVTAHDFVYSWQRLADPNTASPYASYLQYGHIANIDDIIA-------------GK----KPATDLGVKALD-----------DH-TFEVTLSEPVPYFYKLLVHPSVSPVPKSAVEKFGDK--------------WTQPANIVTNGAYKLKNWVVNERIVLERNPQYWDN-----AKTVINQVTYLPISSEVTDVNRYRSGEIDMTYNNMPIELFQKLKKEIPNEVRVDPYLCTYYYEINNQK-APFNDVRVRTALKLALDRDIIVNKVKNQGDLPAYSYTPPYTDGAKLVEPEWFKWSQQKRNEEAKKLLAE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JET.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18281 for 2464 contacts (-7.4/contact) +
2D Compatibility (PS) -34879 + (NN) -16790 + (LL) 13276
1D Compatibility (HY) -10400 + (ID) 3350
Total energy: -70424.0 ( -28.58 by residue)
QMean score : 0.395
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