Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYRYKPLLQSIHLPNGIKISNRFVLSPMTVNASTKEGYITK---ADLAYAARRSNSAGMQVTGAAYIEPYGKLFEYGFNIDHDACIPGLTNMASTMKQHGSLAIIQLAHAGRFSNQAILNFG------------KVYGPSPMTLHSPIEHVVIAMSHEKINSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGGINSPESALDALQ--HADMVGMSSPFVTEPDFVHKLAEQRPHDINLEFSMADLEDLAIPHAAFKDIVKMMDYGEGLKKHTRDALRQLEQNYHDSSS |
| 3L68 Chain:A ((13-341)) | ----------------VTLRNRIAIPPMS-QYMAEDGMINDWHHVHLAGLAR--GGAGLLVVEATAVAPEGRITPGCAGIWSDAHAQAFVPVVQAIKAAGSVPGIQIAHAGRKASANRPWEGDDHIAADDTRGWETIAPSAIAFGAHLPKVPREMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGG-SFDNRSRFLLETLAAVREVW----PENLPLTARFGVLEYDGRD-EQTLEESIELAR-RFKAGGLDLLSVSV--GFTIPDTNIPWGPAFMGPIAERVRRE--AKLPVTSAWGFGTPQLAEAALQANQLDLVSVGRAHLADPHWAYFAAKE--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L68.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203825 for 2803 contacts (-72.7/contact) +
2D Compatibility (PS) -33054 + (NN) -11871 + (LL) 5616
1D Compatibility (HY) -11600 + (ID) 4700
Total energy: -259434.0 ( -92.56 by residue)
QMean score : 0.448
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