Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEKKGFNFNIIKNDPLDGHKGTNIGSISLDNIAPVFIDVANKEAFIDIGGMHARAKVEKGVKWITDKAAVEGDEAKEYWLCWVTTERNEQGPYYAGLTACYLLVNKA--IRRGYKSMPEHVNMMDKSMKHHIIIDQIGDENKAILKDFLMNHDEGMWKLSSDALHQAFN |
2FW5 Chain:A ((19-77)) | --------------------------------------------------------------------------------------------LTRTECSACHMAYPAALLPARSWTAL---MADLPNHFGEDA---SLDEASRGQIESYLVANAADS------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FW5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22351 for 337 contacts (-66.3/contact) +
2D Compatibility (PS) -5724 + (NN) -59 + (LL) 6596
1D Compatibility (HY) -2000 + (ID) 250
Total energy: -23788.0 ( -70.59 by residue)
QMean score : 0.071
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