Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLIISIMAVMLFLTGCGKSQEKATLEKDIDNLQKENKELKDKKEKLQQEKEKLADKQKDLEKEVKDLKPSKEDNKDDKKDEDKNKDKDKDKEASQDKQSKDQTKSSDKDNHKKPTSTDKDQKANDKHQS
1T8I Chain:A ((466-540))
-------------------------TFEKSMMNLQT----------KIDAKKEQLADARRDLKSAKADAKVMK-----DAKTKKVVESKKKAVQRLEEQLMKLEVQATDREENKQ----------------
General information:
TITO was launched using:
RESULT:
Template:
1T8I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 66072 for 391 contacts (169.0/contact) +
2D Compatibility (PS) -8274 + (NN) -4454 + (LL) 3308
1D Compatibility (HY) -1600 + (ID) 1200
Total energy: 53852.0 ( 137.73 by residue)
QMean score : 0.378
(partial model without unconserved sides chains):
PDB file :
Tito_1T8I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T8I-query.scw
PDB file :
Tito_Scwrl_1T8I.pdb
: