Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTHLLIVDDEQDIVDICQTYFEYEGYKVTTTTSGKEAISLL-SNDIDIMVLDIMMPEVNGYDIVKEMKRQKLDIPFIYLTAKTQEHDTIYALTLGADDYVKKPFSPRELVLRINNLLTRMKKYHHQPVEQLSFDELTLINLSKVVTVNGHEVPMRIKEFELLWYLASRENEVISKSELLEKVWGYDYYEDANTVNVHIHRIREKLEKESFTTYTITTVWGLGYKFERSR
2A9P Chain:A ((2-118))
-KKILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILDLMLPEIDGLEVAKTI-RKTSSVPILMLSAKDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLRR--------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2A9P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96442 for 940 contacts (-102.6/contact) +
2D Compatibility (PS) -12268 + (NN) -3481 + (LL) 9412
1D Compatibility (HY) -12000 + (ID) 2600
Total energy: -117379.0 ( -124.87 by residue)
QMean score : 0.672
(partial model without unconserved sides chains):
PDB file :
Tito_2A9P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A9P-query.scw
PDB file :
Tito_Scwrl_2A9P.pdb
: