Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDNNEKEKSKSELLVVTGLSGAGKSLVIQCLEDMGYFCVDNLPPVLLPKFVELMEQGNPSLRKVAIAIDLRGKELFNSLVAVVDKVKSESDVIIDVMFLEASTEKLISRYKETRRAHPLMEQGKRSLINAINDEREHLSQIRSIA--NF--VIDTTKLSPKELKERIRRYYEDEEFETFTINVTSFGFKHGIQMDADLVFDVRFLPNPYYVVDLRPLTGLDKDVYNYVMKWKETEIFFEKLTDLLDFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAERLGNYLNEVFEYNVYVHHRDAHIESGEKK |
| 3ACY Chain:A ((45-139)) | -----------------------------------------------------------------------------AIYAVCRKIDDSIDVYGDIQFLNQIKEDIQSIEKYPYEYHHF--QSDRRIMMAL----QHVAQHKNIAFQSFYNLIDTV--------------YKDQHFTMFETDAELFGYCYGV------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ACY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2837 for 570 contacts (-5.0/contact) +
2D Compatibility (PS) -9221 + (NN) -1499 + (LL) 14476
1D Compatibility (HY) -7600 + (ID) 1500
Total energy: -8181.0 ( -14.35 by residue)
QMean score : 0.315
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