Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYLLSAGICMAIVSILLIGMAISNVSKGQYAKRFFFFATSCLVLTLVVVSSLSSSANASQTDNGVNRSGSEDPTVYSATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENANKIEVEFDKGQRTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKPNNTHEQLLRKSEAQAKKEKLNIWSEDNADSGQ
1EY4 Chain:A ((6-141))
------------------------------------------------------------------------------------KLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPETKHPKKGVEKYGPEAAAFTKKMVENAKKIEVEFDKGQRTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKPNNTHEQHLRKSEAQAKKEKLNIWS--------
General information:
TITO was launched using:
RESULT:
Template:
1EY4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39470 for 1077 contacts (-36.6/contact) +
2D Compatibility (PS) -14525 + (NN) -3541 + (LL) 5904
1D Compatibility (HY) -15600 + (ID) 6650
Total energy: -73882.0 ( -68.60 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_1EY4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EY4-query.scw
PDB file :
Tito_Scwrl_1EY4.pdb
: