Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEIKTLTNNDFNEYKRLVSTVN-E-EFTQDSHYSQTMTDTLIHDILNQGSP--KCIVFGCYENETLIATAALEQIRYVGKEHKSLIKYNFVTNND--KSINSELINFIINYARQNN-YESLLTSIVSNNIGAKVFYSALGFDILGFEKNAI-KIGNTYFDEHWLFYDLINK
2I79 Chain:A ((5-171))
-LLIREAEPKDAAELVAFLNRVSLETDFTSLDGDGILLTSEEMEIFLNKQASSDNQITLLAFLNGKIAGIVNITADQRKRVRHIGDLF-IVIGKRYWNNGLGSLLLEEAIEWAQASGILRRLQLTVQTRNQAAVHLYQKHGFVIEGSQERGAYIEEGKFIDVYLMGKLI---
General information:
TITO was launched using:
RESULT:
Template:
2I79.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78468 for 1156 contacts (-67.9/contact) +
2D Compatibility (PS) -16749 + (NN) -73 + (LL) 488
1D Compatibility (HY) -4400 + (ID) 1300
Total energy: -100502.0 ( -86.94 by residue)
QMean score : 0.372
(partial model without unconserved sides chains):
PDB file :
Tito_2I79.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I79-query.scw
PDB file :
Tito_Scwrl_2I79.pdb
: