Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MASTLEIKDLHVSIEDKEILKGVNLTINTDEIHAIMGPNGTGKSTLSSAI--MGHPSYEVTKGEVLLDGVNILELEVDERAKAGLFLAMQYPSEITGVTN---ADFMRSAINAKREEGQEINLMQFIKKLDKNMDFLDIDKDMAQRYLNEGFSGGEKKRNEILQLMMLEPKFAILDEIDSGLDIDALKVVSKGINQMRGENFGALMITHYQRLLNYITPDKVHVMYAGKVVKSGG-PELAKRLEEEGYEWVKEEFGSAE 1VPL Chain:A ((18-248)) ------VKDLRKRIGKKEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPS----SGIVTVFGKNVVE-EPHEVRKLISYL----PEEAGAYRNMQGIEYLRFVAGFYASSSSEIEEM-----VERATEIAGLGEKIKDRV--STYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRKILKQASQEGLTILVSSHNMLEVEFLC-DRIALIHNGTIVETGTVEELKERYKAQNIEEVFEE-----

General information: TITO was launched using: RESULT: Template: 1VPL.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output 3D Compatibility (PKB) -104406 for 1793 contacts (-58.2/contact) + 2D Compatibility (PS) -23887 + (NN) -5354 + (LL) 2556 1D Compatibility (HY) -13600 + (ID) 3550 Total energy: -148241.0 ( -82.68 by residue) QMean score : 0.471

(partial model without unconserved sides chains): PDB file : Tito_1VPL.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1VPL-query.scw PDB file : Tito_Scwrl_1VPL.pdb: