Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVVYGADVICASCVNAPTSKDIYDWLQPLLKRKYPNISFKYTYIDITKDNDNLTDHDLQFIERIEQDELFYPLITMNDEYVADGYIQTKQITRFIDQKLVNE
1EGO Chain:A ((3-71))
TVIFGRS-GCPYCVR------AKDLAEKL-SNERDD--FQYQYVDIRAEGI----TKEDLQQKAGKPVETVPQIFVDQQHIGG-------------------
General information:
TITO was launched using:
RESULT:
Template:
1EGO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42871 for 441 contacts (-97.2/contact) +
2D Compatibility (PS) -7294 + (NN) -2275 + (LL) 2304
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -52836.0 ( -119.81 by residue)
QMean score : 0.482
(partial model without unconserved sides chains):
PDB file :
Tito_1EGO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EGO-query.scw
PDB file :
Tito_Scwrl_1EGO.pdb
: