Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKISKALTWFIISFIIFHLILFIMWGEHQEYWYLYTGIMLIAGISYVFYQRDIESKRLLTSIGVGIITAIILIMLQLLFSLITSNLSYSSLIKELARTGVNWKWQMLVTLLFVIPCHELYMRTVLQKELTHFSIPKWIAILITAICSSSLFIYLDNWWIVTFIFVAQVILSLSYEYTRRIATTSVAQIVAIILLLIFNA |
1G39 Chain:B ((2-31)) | -------------------------------------------------------------------VSKLSQLQTELLAALLESGLSKEALIQALG------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G39.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14132 for 120 contacts (-117.8/contact) +
2D Compatibility (PS) -3202 + (NN) -1435 + (LL) 18504
1D Compatibility (HY) -2000 + (ID) 450
Total energy: -2715.0 ( -22.62 by residue)
QMean score : 0.217
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