Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRKTYEKIANINGMFNMLEQQIIHSQDMAHFRSEFFYVNHEHRENYEALLIYYKNSIDNPIVDGACYILALPEIFNSVDVFESELPFSWVYDENGITETMKSLSIPLQYLVAAALEVTDVNIFKPSGFTMGMNNWNIAQMRIFWQ-YTAIIRKEAL
1HUL Chain:A ((5-112))
--------------------------IPTSALVKETLALLSTHRTLLIA-----NETLRIPVPVHKNHQLCTEEIFQGIGTLESQTV-----QGGTVERLFKNLSLIKKYIDGQKKKC-------------GEERRRVNQFLDYLQEFLGVMNTEWI
General information:
TITO was launched using:
RESULT:
Template:
1HUL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24225 for 562 contacts (-43.1/contact) +
2D Compatibility (PS) -11078 + (NN) -504 + (LL) 4112
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -36645.0 ( -65.20 by residue)
QMean score : 0.216
(partial model without unconserved sides chains):
PDB file :
Tito_1HUL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HUL-query.scw
PDB file :
Tito_Scwrl_1HUL.pdb
: