Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLQKAPLVTSGLVL-GLLGLGNLLKDLSLTLNAVCGIFAFLIWIHLLCTMIK-YFNNV-KEQLNSPLVSSVFTTFFMSGFLGTTYLNTFFSNITFINSLITPIWILCLVGIMTHMIIFSIKYLKDFSLENVYPSWTVLFIGIAIAGLTAPVSGCFFIGQLTVIYGFVATCIVLPIVFKRLKAFPLQTSIKPNTSTICAPFSLVAAAYVIAFPKANAFIVIIFLILAQIFYFYIIIQLPKLLKEPFSPV-FSAFTFPLVISAT-A-LKN-SLP-VL-MFPDIWKGLLFIEVLLATVIVLRVFIG----------YLHFFLKKENQDKFLRNASQ------- |
| 4H3W Chain:A ((38-350)) | -ESWVAPL------GMGYVTSDDVVNVEVPSIREVDGAYV-------------MIYDGEMIGSLRAAS-----DVEIASEDITTGDIDGLFDG-DFVLALTNPHITLSNVN---ASLDCSLSIEAENTSEATSSDFTLS-----------TVSPNIWIGPLDPTDAFFVN--ELPGIVQIVPQIHLSLSADSQWTNAPAD-ALSELRYAVELP----------LTPAPEFSAVSVERIEDAFDEDFVDYIFSDGSARIYGEVTNEMPFDMSIEMVIMDENNVPVDIQFPAQEVGQSGEVIFEITEDMPMDARHIDLNLHLTGRDQGEALGQTTFNLLEGGI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H3W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159973 for 1702 contacts (-94.0/contact) +
2D Compatibility (PS) -26230 + (NN) 10867 + (LL) 6392
1D Compatibility (HY) 22000 + (ID) 900
Total energy: -147844.0 ( -86.86 by residue)
QMean score : 0.041
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