Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLIKNGKVLQNGELQQADILIDGKVIKQIAPAIEPSNGVDIIDAKGHFVSPGFVDVHVHLREP--GGEYKETIETGTKAAARGGFTTVCPMPNTRPVPDS----VEHFEALQKLIDDNAQVRVLPYASITTRQLGKELVDFPALVKE-GAFAF----TDDGVGVQTASMMYEGMIEAAKVNKAIVAHCEDNSLIYGGAMHEGKRSKELGIPG-------IPNICESVQIARDVLLAEAAGCHYHVCHVSTKESVRVIRDAKRAGIHVTAEVTPHHLLLT-----EDDIPGNNAIYKMNPPLR-STEDREALLEGLLDGTIDCIATDHAPHARDEKAQPME---KAPFGIVGSETAFPLLYTHFVKNGDWTLQQLVDYLTIKPCETFNL--EYGTLKENGYADLTIIDLDSEQEIKGEDFLSKADNTPFIGYKVYGNPILTMVEGEVKFEGDK |
| 4B90 Chain:A ((33-470)) | --LIKGGKVVNDDCTHEADVYIENGIIQQVGRELMIPGGAKVIDATGKLVIPGGIDTSTHFHQTFMNATCVDDFYHGTKAALVGGTTMII----GHVLPDKETSLVDAYEKCRGLADPKVCCDYALHVGI-TWWAPKVKAEMETLVREKGVNSFQMFMTYKDLYMLRDSELYQVLHACKDIGAIARVHAENGELVAEGA----KEALDLGITGPEGIEISRPEELEAEATHRVITIANRTHCPIYLVNVSSISAGDVIAAAKMQGKVVLAETTTAHATLTGLHYYHQDW-SHAAAYVTVPPLRLDTNTSTYLMSLLANDTLNIVASDHRPFTTKQKAMGKEDFTKIPHGVSGVQDRMSVIWERGVVGGKMDENRFVAVTSSNAAKLLNLYPRKGRIIPGADADVVVWDPEATKTISASTQVQGGDFNLYENMRCHGVPLVTISRGRVVYE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B90.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178685 for 3665 contacts (-48.8/contact) +
2D Compatibility (PS) -44198 + (NN) -15257 + (LL) 32
1D Compatibility (HY) -17200 + (ID) 5700
Total energy: -261008.0 ( -71.22 by residue)
QMean score : 0.498
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