Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIDYLTLFPEMFDGVLNHSIMKRAQENNKLQINTVNFRDYAINKHNQVDDYPYGGGQGMVLKPEPVFNAMED-LDVTEQTRVILMCPQGEPFSHQKAVELSKADHIVFICGHYEGYDERIRTHLVTDEISMGDYVLTGGELPAMTMTDAIVRLIPGVLGNEQSHQDDSFSDGLLEFPQYTRPREFKGLTVPDVLLSGNHANIDAWRHEQKLIRTYNKRPDLIEKYPLTNEDKQILERYKIGLKKG
4IG6 Chain:A ((22-243))
MIFNVLTIFPQMFPGPLGVSNLGSALKKGLWTLNVFDIRAFANNKHNTVDDTPYGGGPGMLLRADVLGRCIDEVLSLHPNTKLMFTSPRGVSFTQDIARQTMNFDNITLLCGRFEGIDERVVDFYKLQEVSIGDYVLSGGELAAMVIIDTCVRMVPGVIGNAESLKQESM-EGSLEYPQYTRPASWKGMEVPEVLLTGNHGEIEKWRRNASLSITAARRPDLL-----------------------
General information:
TITO was launched using:
RESULT:
Template:
4IG6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116721 for 1577 contacts (-74.0/contact) +
2D Compatibility (PS) -24092 + (NN) -9724 + (LL) 1356
1D Compatibility (HY) -20400 + (ID) 4750
Total energy: -174331.0 ( -110.55 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_4IG6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IG6-query.scw
PDB file :
Tito_Scwrl_4IG6.pdb
: