Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSNELL--LATEYLEKEKKIPRAVLIDAIEAALITAYKKN--YDSARNVRVELNMDQGTFKVIARKDVVEEVFDDRDEVDLSTALVKNPAYEIGDIYEEDVTPKDFGRVGAQAA-KQAVMQRLRDAEREILFEEFIDKEEDILTGIIDRVDHRYVYVNLGRIEAVLSEAERSPNEKYIPNERIKVYVNKVEQTTKGPQIYVSRSHPGLLKRLFEQEVPEIYDGTVIVKSVAREAGDRSKISVFSENNDIDAVGACVGAKGARVEAVVEELGGEKIDIVQWNEDPKVFVKNALSPSQVLEVIVDETNQSTVVVVPDYQLSLAIGKRGQNARLAAK--LTGWKIDIKSETDAREAGIYPVVE-----AEKVTEEDIALEDADTTESTEEVNDVSVETNVEKESE--- |
| 4MT7 Chain:A ((96-432)) | QNRDQMRANVINEIMSTERHYIKH-LKDICEGYLKQCRKRRDMFSDEQLKVIFGNIEDIYRFQMGFVRDLEKQYNNDD----------PHLSEIGPCFLEH--QDGFWIYSEYCNNHLDACMELSKLMKDSRYQHFFEACRLL-QQMIDI-----------AIDGFL----------LTPVQKICKYPLQLAELLK----YTAQDHSD--YRYVAAALAVMRNVTQQINERKRRLENIDKIAQWQAS--------VLDWEGDDILDRSSE--LIYTGEMAWIYQPY------------------GRNQQRVFFLFDHQMVLCKKDLIRRDILYYKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLHNKETEEVHLFFAKKLEEKIRWLRAFREERKMVQEDEKIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MT7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 18610 for 2182 contacts (8.5/contact) +
2D Compatibility (PS) -34224 + (NN) -5052 + (LL) 5080
1D Compatibility (HY) -10800 + (ID) 2750
Total energy: -29136.0 ( -13.35 by residue)
QMean score : 0.276
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