Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYNKDDVLKQADNIANKIKNLDTIKTYQQIEAQIHQNQTIKTKMDMLKKHQKQAVNFQNYGKQNALEQSEHTIQSIEAEINTLPIVEQFQTSQYEANQLLKMFVSTMETRLNDHNKAKHSD |
1RKC Chain:A ((217-257)) | -------------------------------------------------------NSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDA------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RKC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5156 for 144 contacts (35.8/contact) +
2D Compatibility (PS) -4473 + (NN) -187 + (LL) 6412
1D Compatibility (HY) -1200 + (ID) 650
Total energy: 5058.0 ( 35.12 by residue)
QMean score : 0.443
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