Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLNIALLGLGTVGSGVVKIIEENRQQIQDTLNKDIVIKH--ILVRDKSKKRPLNISQYHLTEDVNEILNDDSLDIIVEVMGGIEPTVDWLRTALKNKKHVITANKDLLAVHLKLLEDLAEENGVALKFEASVAGGIPIVNAINNGLNANNISKFMGILNGTSNFILSKMTKEQTTFEEALDEAKRLGFAEADPTDDVEGVDAARKVVITSYLSFNQVIKLNDVKRRGISGVTLTDINVADQLGYKIKLIGKGIYENGKVNASVEPTLIDKKHQLAAVEDEYNAIYVIGDAVGDTMFYGKGAGSLATGSAVVSDLLNVALFFESDLHTLPPHFELKTDKTREMMDSDAEINIKEKSNFFVVVNHVKGSIENFENELKAILPFHRSLRVANYDNQSYAAVIVGLESSPEELITKHGYEVDKVYPVEGV |
2EJW Chain:E ((1-283)) | MEALKIALLGGGTVGSAFYNLVLERAEELSAF---GVVPRFLGVLVRDPRKPR--AIPQELLRAEPFDLLEAD---LVVEAMGGVEAPLRLVLPALEAGIPLITANKALLAEAWESLRPFAEEG--LIYHEASVMAGTPALSFLET-LRGSELLELHGILNGTTLYILQEMEKGRT-YAEALLEAQRLGYAEADPTLDVEGIDAAHKLTLLARLLVDPGFPFAEVEAQGIARLTPEVLQKAEARGERVRLVASLFGEGGRWRAAVAPRRLPQDHPLARARG--NALWVRARPLGEAF----------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EJW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156455 for 2266 contacts (-69.0/contact) +
2D Compatibility (PS) -29724 + (NN) -2432 + (LL) 8888
1D Compatibility (HY) -22400 + (ID) 5200
Total energy: -207323.0 ( -91.49 by residue)
QMean score : 0.484
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