Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYNYHLLEDRDVLCIDQKSFFASVSCIEKGLDP-LETKLAVV---ADTKRQGSVILAATPKLKELGIKTGSRLFE----IPHRNDIYIINPSMRK--YLNVSVAISKIALRYIPPEDLHQYSIDEFFMDVTDSYHRFSSTVHAFCERLKREIYEETGIYCTVGIGSNMLLSKIAMDVEAKHSQNGIAEWRYQDVPTKLWPIQPLRDFWGINRRTEAKLNKRGIFTIGDLAKYPYKFLKKEFGILGVDMHLHANGIDQSKVREKHKISNPSICKSQILMRDYHFDEAKVVMQELIEDVASRVRARKKVARTIHFAFGYSDEGGVHKQYTLKDPTNLEKDIYKVVMHFADKLCNKQALYRTLSISLSQFINEDERQLSLFEDEYQRKRDECLAKTIDQLHLKYGKGIVSKAVSFTEAGTKHGRLGLMAGHKM |
4QWB Chain:A ((3-218)) | -----------VLFVDFDYFYAQV---EEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILP--NAVYL---PMRKEVYQQVSSRIMNLLREY--SEKIEIASIDEAYLDISDKVRDYREAYNLGLE-IKNKILEKEKITVTVGISKNKVFAKIAADM---AKPNGIKVIDDEEVKRLIRELD-IADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137070 for 1550 contacts (-88.4/contact) +
2D Compatibility (PS) -22058 + (NN) -8158 + (LL) 15528
1D Compatibility (HY) -16800 + (ID) 3350
Total energy: -171908.0 ( -110.91 by residue)
QMean score : 0.479
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