Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKRKLRNNWIIVTTMITFVTIFLFCLIIIFFLKDTLHNSELDDAERSSSDINNLFHSKPVKDISALDLNASLGNFQEIIIYDEHNNKLFETSNDNTVRVEPGYEHRYFDRVIKKRYKGIEYLIIKEPITTQDFKGYSLLIHSLENYDNIVKSLYIIALAFGVIATIITATISYVFSTQITKPLVSLSNKMIEIRRDGFQNKLQLNTNYEEIDNLANTFNEMMSQIEESFNQQRQFVEDASHELRTPLQIIQGHLNLI-QRWGKKDPAVLEE---SLNISIEEMNRII-KLVEEL-----LELTKGDVNDISSEAQTVHINDEIRSRIHSLKQLHPDYQFDTDLTSKNLEIKMKPHQFEQLFLIFIDNAIKYDVKNKKIKVKTRLKNKQKIIEITDHGIGIPEEDQDFIFDRFYRVDKSRSRSQGGNGLGLSIAQKIIQLNGGSIKIKSEINKGTTFKIIF |
| 4KP4 Chain:A ((9-219)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADDRTLLMAGVSHDLRTPLTRIRAYAETIYNSLGELDLSTLKELAESINKDIEECNAIIEQFIDYLRTGQEMPMEMADLNAVLGEVIAAESGYE--------------REIETALYPGSIEVKMHPLSIKRAVANMVVNAARYG--NGWIKVSSGTEPNRAWFQVEDDGPGIAPEQRKHLFQPFVRGDSARTIS--GTGLGLAIVQRIVDNHNGMLELGTSERGGLSIR--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4KP4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -11836 for 1470 contacts (-8.1/contact) +
2D Compatibility (PS) -21568 + (NN) -4888 + (LL) 19480
1D Compatibility (HY) -11600 + (ID) 3000
Total energy: -33412.0 ( -22.73 by residue)
QMean score : 0.375
|
|
|