Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----------------MSQWK-RISLLIVFALVFG------IIAFFHESRLGKWIDNEVYEF----------------IYS----------SESFITTSIMLGATKVGEVWA---MLCISL-------LLVAYLMLKRHKIEALFFALTMALSGILNP--ALKNIFDRERPTLLRLIDITGFSFPSGHAMGSTAYFGSGIYLLNRLNQGNSKGILIGLCAAMI----------------LLISISRVYLGVHYPTDIIAGIIG------------GVFCIILSTLLLRNKLIN |
4RHJ Chain:A ((19-318)) | SHMFSKFLMNVKGVTPRGSDWANRLGPVALFGYGAGMPRRAPLLDFFLQSPRDCDHYAELTIHDKGPIECPPETVMFMPVLNCGQMLDEAAGTETPTSDEWYLGSLEASTELLEKGYVPVSVGGDGSATLSMVEAYKRLFPSDDIVIVHFSARPSVSDPRSPLRVLLDKG---LLKGVVSVGNRQVSSEDRKVRKLHK--MFYMDMRDIRNDYPVFISIDASVLDPAFAPAVDSPVAGGLSTRDLLHIMNGIRGPKVVGIDVYGYNPDLDVYRKDNVGLTAIALSKIIKEGILK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RHJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -241881 for 1496 contacts (-161.7/contact) +
2D Compatibility (PS) -21082 + (NN) -6606 + (LL) -188
1D Compatibility (HY) -6000 + (ID) 1450
Total energy: -277207.0 ( -185.30 by residue)
QMean score : 0.230
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