Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MSKTVV-RKNESLEDALRRFKRSVSK-SGTIQEV-----RKREFYEKPSVKRKKKSEAARKRKFK------------------
2KL8 Chain:A ((1-85))
MEMDIRFRGDDLEAFEKALKEMIRQARKFAGTVTYTLDGNDLEIRITGVPEQVRKELAKEAERLAKEFNITVTYTIRLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2KL8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 26660 for 342 contacts (78.0/contact) +
2D Compatibility (PS) -6540 + (NN) -2969 + (LL) 0
1D Compatibility (HY) -400 + (ID) 650
Total energy: 16101.0 ( 47.08 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_2KL8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KL8-query.scw
PDB file :
Tito_Scwrl_2KL8.pdb
: