Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANIKSAIKRVKTTEKAEARNISQKSAMRTAVKNA-KTAVSNNADNKNELVSLAVKLVDKAAQSNLIHSNKADRIKSQLMTANK
1XNR Chain:T ((11-85))
-----SALKRHRQSLKRRLRNKAKKSAIKTLSKKAIQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLM----
General information:
TITO was launched using:
RESULT:
Template:
1XNR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2706 for 442 contacts (-6.1/contact) +
2D Compatibility (PS) -8031 + (NN) -3076 + (LL) 720
1D Compatibility (HY) -400 + (ID) 1450
Total energy: -14943.0 ( -33.81 by residue)
QMean score : 0.748
(partial model without unconserved sides chains):
PDB file :
Tito_1XNR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XNR-query.scw
PDB file :
Tito_Scwrl_1XNR.pdb
: