Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITVDITVNDEGKVTDVIMDGHADHGEYGHDIVCAGASAVLFGSVNAIIGLTSERPDINYDDNGGHFHIRSVDTNNDEAQLILQTMLVSLQTIEEEYNENIRLNYK
5A08 Chain:A ((116-138))
----------------------------------------------------------------------------------LEDIISSIQQLEEEYNKNFGYPY-
General information:
TITO was launched using:
RESULT:
Template:
5A08.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -453 for 90 contacts (-5.0/contact) +
2D Compatibility (PS) -2426 + (NN) 356 + (LL) 3912
1D Compatibility (HY) -3200 + (ID) 500
Total energy: -2311.0 ( -25.68 by residue)
QMean score : 0.458
(partial model without unconserved sides chains):
PDB file :
Tito_5A08.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5A08-query.scw
PDB file :
Tito_Scwrl_5A08.pdb
: