Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKKLLMNFFIVSPLLLATIATDFTPVPLSSNQIIKTAKASTNDNIKDLLDWYSSGSDTFTNSEVLDNSLGSMRIKNTDGSISLIIFPSPYYSPAFTKGEKVDLNTKRTKKSQHTSEGTYIHFQ----------ISGVTNTEKLPTPIELPLKV-KVHGKD--SPLKYWPKFDKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMN--DGSTYQSDLSKKFEYNTEKPPINIDEIKTIEAEIN |
| 1V1O Chain:A ((24-211)) | --------------------------------------------DIRDLHRYYSSESFEYSNV--------SGKVENYNGSNVVRFNPKDQNHQLFLLGK-----DKEQYKEGLQGQNVFVVQELIDPNGRLSTVGGVTKKNNKTSETNTPLFVNKVNGEDLDASIDSFL-IQKEEISLKELDFKIRQQLVNNYGLYKGTSK---YGKIIINLKDENKVEIDLGDKLQFERMGDVLNSKDIRGISVTIN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V1O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12489 for 1276 contacts (-9.8/contact) +
2D Compatibility (PS) -18664 + (NN) -3505 + (LL) 3616
1D Compatibility (HY) -9200 + (ID) 2600
Total energy: -42842.0 ( -33.58 by residue)
QMean score : 0.345
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