Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIPTFSSIIFLFFKLKYYAIVTILVTMIIMYLSNFATVGLFLTLRKYTTDPAILLPLYILSFSSVSLLATYLVRISLKKFKKSYLSLNKTYMIIISFVLFATFAFFYIYSTNTSSNGDSLIPYALVFIGLIIFISVVILIMSLFTLKEMKYKRNQEEIETYYEYTLKIEAINNEMRKFRHDYVNILTTLSEYIRED-----DMIGLRAYFNKNIVPMKDNLQMNAIKLNGIENLKV----------REIKGLITAKILRAQEMNIPISIEIPDEVSSINLNMIDLSRSIGIILDNAIEASTEIDDPIIRVAFIESENSVTFIVMNKCADD-IPRIHELFQESFSTKGEGRGLGLSTLKEIAD-NADNVLLDTII-ENGFFIQKVEIINN |
| 3A0R Chain:A ((130-346)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------SILGEMTARVAHEIRNPITIIGGFIMRMKKHLDDPETLKKYINIITNELS-RLETIVKEILEYSKER-VLEFTEFNLNELIREVYVLFEEKIRKMNIDFCFETDNEDLRVEADRTRIKQVLINLVQNAIEATGE--NGKIKITSEDMYTKVRVSVWNSGPPIPEELKEKIFSPFFTT------LGLSICRKIIEDEHGGKIWTENRENGVVFIFEIPKTP- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A0R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52780 for 1314 contacts (-40.2/contact) +
2D Compatibility (PS) -20175 + (NN) 62 + (LL) 16868
1D Compatibility (HY) -6400 + (ID) 1750
Total energy: -64175.0 ( -48.84 by residue)
QMean score : 0.401
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