Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKD-KYHVDIIYITNDGDWRKQNNITAEIKSTDELHLENGEALEISQLLKESSSGQP------------YDAVFPLLHGPNGEDGTIQGLFEVLDVPYVGNGVLSAASSMDKLVMKQLFEHRGLPQLPYISFLRSEYEKYEHNILKLVNDKLNYPVFVKPANLGSSVGISKCNNEAELKEGIKEAFQFDRKLVIEQGVN-AREIEVAVLGNDYP------EATWPGEVVKDVAFYDYKSKYKDGK-VQLQIPADLDEDVQLTLRNMALEAFKATDCSGLVRADFFVTEDNQIYINETNAMPGFTAFSMYPKLWENMGLSYPELITKLIELAKERHQDKQKNKYKID |
| 1EHI Chain:A ((3-362)) | --KKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIA-------QNGFFLDTESSKKILALEDEQPIVDAFMKTVDASDPLARIHALKSAGDFDIFFPVVHGNLGEDGTLQGLFKLLDKPYVGAPLRGHAVSFDKALTKELLTVNGIRNTKYIVVDPESANNWSWD--KIVAE-LGNIVFVKAANQGSSVGISRVTNAEEYTEALSDSFQYDYKVLIEEAVNGARELEVGVIGNDQPLVSEIGAHTVPNQGSGD-GWYDYNNKFVDNSAVHFQIPAQLSPEVTKEVKQMALDAYKVLNLRGEARMDFLLDENNVPYLGEPNTLPGFTNMSLFKRLWDYSDINNAKLVDMLIDYGFEDFAQNKKLS---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EHI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127427 for 2742 contacts (-46.5/contact) +
2D Compatibility (PS) -38251 + (NN) -26160 + (LL) 1096
1D Compatibility (HY) -27600 + (ID) 6550
Total energy: -224892.0 ( -82.02 by residue)
QMean score : 0.522
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