Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKTLLASSLAVGLGIVAGNAGHEAHASEADLNKASLAQMAQSNDQTLNQKPIEAGAYNYTFDYEGFTYHFESDGTHFAWNYHATGANGANMSAQAPATNNVEPSAVQANQVQSQEVEAPQNAQTQQPQASTSNNSQVTATPTESKASEGSSVNVNAHLKQIAQRESGGNIHAVNP--TSGAAGKYQFLQ-ST-WDSV---APAKYKGVSPANA--PESVQDAAAVKLYNTGGAGHWVTA |
| 1HML Chain:A ((36-124)) | -----------------------------------------------------------------------------------------------------------------------------------------------------GYGGIALPELICTMFHTSGYDTQAIVENNESTEYGLFQISNKLWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKILDIKGIDYWL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9438 for 539 contacts (17.5/contact) +
2D Compatibility (PS) -8577 + (NN) -5048 + (LL) 8492
1D Compatibility (HY) 400 + (ID) 650
Total energy: 4055.0 ( 7.52 by residue)
QMean score : 0.219
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