Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIILMGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQAEALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDVTKDVIDILDHL
4MKH Chain:A ((3-214))
MNIVLMGLPGAGKGTLAEKIVEKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVRERLSKSDCERGFLLDGFPRTVAQAEALEEILEEMGRPIDYVINIQVRKEELMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVTKRLEVNMKQMAPLLAFYDSKEVLVNVNGERDIEDVFADVDVIL---
General information:
TITO was launched using:
RESULT:
Template:
4MKH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72299 for 1641 contacts (-44.1/contact) +
2D Compatibility (PS) -22751 + (NN) -11458 + (LL) 144
1D Compatibility (HY) -26000 + (ID) 7450
Total energy: -139814.0 ( -85.20 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_4MKH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MKH-query.scw
PDB file :
Tito_Scwrl_4MKH.pdb
: