Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQFLDFLIALL-----PALFWGSVVLIN---------VFVGGGP-YNQIRGTTL---GALIVGLGLLITG-FAKFNNPTVIIVGLISGALW--------AFGQANQLKSI--SLIGVSNTMPVSTGMQLVGTTLFSVIFLGEW-SSMTQIIFGLIAMILLVTG------------------VALTSLKAKNERQS-----DNPEFKKAMGILIVS-TVGYVGFVVLGD------IFGVGGTD-----------ALFFQSVGMAI-----GGFILSMNHKTSLKSTALNLLPGVIWGIGNLFMFYSQPKVGVATSFSLSQLLVIVSTLGG--------IFILGERKDRRQMTGIWAGIIIIVIAAIILGNLK
4OJV Chain:A ((1-369))--MVVFEITILGANGGPTEYGTQCFILKPARTEDPELIAVDGGAGMYQLREMLVQGDDELVPSFYEHDREPIEFFIDSKLNIQKGLSKSLLQSLKRQGEHFESANTMKKTYEVFQGITDYYITHPHLDHISGLVVNSPSIYEQENSKKKTIWGLPHTIDVLQKHVFNDLIWPDLTAERSRKLKLKCLNPKEVQKCTIFPWDVIPFKVHHGIGVKTGAPVYSTFYIFRDRKSKDCIIVCGDVEQDRRESEESLLEEFWSYVAENIPLVHLKGILVECSCPLSSKPEQLYGHLSPIYLINELSNLNTLYN----SSKGLSGLNVIVTHVKSTPAKRDPRLTILEELRFLAEERNLGDLRISIALEGHTLFL--


General information:
TITO was launched using:
RESULT:

Template: 4OJV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -250572 for 2182 contacts (-114.8/contact) +
2D Compatibility (PS) -29303 + (NN) 5557 + (LL) 924
1D Compatibility (HY) -14400 + (ID) 3050
Total energy: -290844.0 ( -133.29 by residue)
QMean score : 0.063

(partial model without unconserved sides chains):
PDB file : Tito_4OJV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OJV-query.scw
PDB file : Tito_Scwrl_4OJV.pdb: