Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFQPLGERVLVERLEEENKTSSGIIIPDNAKEKPLMGVVKAVSH-KISEGCKC----VKEGDVIAFGKYKGAEI-VLDGTEYMVLELEDILGIVGSGSCCHTGNHDHKHAKEHEACCHDHKKH
3WVL Chain:O ((1-95))
MNIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVGNGRILENGEVKPLDVKVGDIVIFNDGYGVKSEKIDNEEVLIMSESDILAIVEA---------------------------
General information:
TITO was launched using:
RESULT:
Template:
3WVL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27015 for 518 contacts (-52.2/contact) +
2D Compatibility (PS) -9549 + (NN) -837 + (LL) 468
1D Compatibility (HY) -6800 + (ID) 1650
Total energy: -45383.0 ( -87.61 by residue)
QMean score : 0.430
(partial model without unconserved sides chains):
PDB file :
Tito_3WVL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WVL-query.scw
PDB file :
Tito_Scwrl_3WVL.pdb
: