Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADSLAGIDQVTSLHKNNELQLLCFRLGKNKDLYAVNVFKIREVVKYHGNLTIISHENNSLVEGLIIIRELTIPLIDMKKWFYYDSQNKSKDLRPYRIEKEKGEDDIVMICEFSRWTIGVRIYEADRILSKKWTEMEQSAGLGGSAGNNKLVSRTRYFDGRLVQVVDIEKMLIDVFPWIEDEKHNDLETLSKIHSNQCVLLADDSPSVLKTMQMILDKLGVKHIDFINGKTLLEHLFNPTTDVSNIGLIITDLEMPEASGFEVIKQV-KNNPLTSKIPIVVNSSMSGSSNEDMARSLKADDFISKS-NPKDIQRVVKQFLELA |
| 2RJN Chain:A ((5-127)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YKNYTVMLVDDEQPILNSLKRLIKRLGCNIITFTSPLDALEALKG-----TSVQLVISDMRMPEMGGEVFLEQVAKSYPDIER--VVISGYADAQATIDAVNRGKISRFLLKPWEDEDVFKVVEKGLQLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RJN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68597 for 962 contacts (-71.3/contact) +
2D Compatibility (PS) -13088 + (NN) -6256 + (LL) 14512
1D Compatibility (HY) -8800 + (ID) 1750
Total energy: -83979.0 ( -87.30 by residue)
QMean score : 0.639
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