Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------------------------------------MIKFVRNVVLFILTAIFLAFMLLVSYCMPHYSVAVISGVEVKRMNENENTPNNKEVKTLARDVYFVQTYDPKDQKSVTVYRNEDTRFGFPFYFKFNSADISALAQSLVNQQVEVQYYGWRINLFNMFPNVIFLKPLKESDEMSKPVFSWILYALLLVGFFISARSVCTLFKGKAH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 1U0B Chain:B ((1-461)) | MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVAMVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPT------------DPTYGV--LSRQDLDQLQAGARVDVVDDKRN-PMDFVLWKMSKEGEPSWPSPWGA-----GRPGWH----IECSAMNCKQLGNHFDIHGGGSDL-MFPHHENEIAQSTCAHDGQY---VNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTWRRK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U0B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100802 for 955 contacts (-105.6/contact) +
2D Compatibility (PS) -14683 + (NN) 3725 + (LL) 2388
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -113172.0 ( -118.50 by residue)
QMean score : 0.325
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