Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMHQIPTPTMSQVIMLNDSITTAEFMVSALRDFFDKPLEEAQKLMLSIHRDGDGVCGVYPYEIAIYKAVCVRDKA-RARFPLRLMVQEVK
3G3P Chain:B ((4-84))
--------PSLYRVLILNDDYTPAEFVVYVLERFFNKSREDATRIMLHVHQNGVGVCGVYTYEVAETKVAQVIDSARRHQHPLQCTMEKD-
General information:
TITO was launched using:
RESULT:
Template:
3G3P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50547 for 562 contacts (-89.9/contact) +
2D Compatibility (PS) -9136 + (NN) -8347 + (LL) 952
1D Compatibility (HY) -7600 + (ID) 1800
Total energy: -76478.0 ( -136.08 by residue)
QMean score : 0.491
(partial model without unconserved sides chains):
PDB file :
Tito_3G3P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G3P-query.scw
PDB file :
Tito_Scwrl_3G3P.pdb
: