Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMFHKALITFIVLWFFLNGLGAYDFKHCQAFFKKASLQKGGV----------------------ALKELP---KGVYLY---------YSKTYPKHAKVIKSDPFIGLYLLQSAP---SEYVYTLRDLDKDALIRPMASIGAN-Q----ATEARLLVGQKGYD------RYAQIS---QKT-QKNGVISNICYQMLGLGVGGN-------------GF-IE----TKFIKRFLNQQEPYYGDIGVRLEERH-------KRLVVAQFDPFFPK--NPFLK-----------NDEILAINDYKIHSLAEFEWVVSNLSYQSLAKVKIKRNHQIKEVTLKVNKRYGGFLLKDTFLERYGIALDERFIITKIGAHLPKGLDFLKLGDRILWVNHKSVSFNPKALREALSTPKIELLVWRQGFEFYIKVR |
3QO6 Chain:A ((12-334)) | -----------------LQTDELATVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVWDKQGHIVTNYHVIRGASDLRVTLADQTTFDAKVVGFDQDKDVAVLRIDAPKNKLRPIPVGVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNS--GGPLLDSSGTLIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLVRFGKVTRPILGIKFAPDQSVEQLGVSGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTVEVLRGDHKEKISVTLEPKP----------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QO6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57874 for 1683 contacts (-34.4/contact) +
2D Compatibility (PS) -23906 + (NN) 7672 + (LL) 9232
1D Compatibility (HY) -7600 + (ID) 1250
Total energy: -73726.0 ( -43.81 by residue)
QMean score : 0.282
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