Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIFLGMALAFSVSMAEKSGAFLGGGFQYSNLENQNTTRTPSANNNTPINTSMFGNNQAAPAQETPSVINTNNYGQMYGVDAMAGYKWFFGKTKRFGFRTYGYYSYNHANLSFVGSKLGIMDGASQVNNFTYGVGFDALYNFYESKEGYNTAGLFVGFGLGGDSFIVQGESYLKSQMQICNNTAGCSASMNTSYFQMPVEFGFRSNFSKHSGIEVGFKLPLFTNQFYKERG-VDGSVDVFYKRNFSIYFNYMINL |
2LHF Chain:A ((36-179)) | --------------------------------------------------------------------------IDNTGTWGIRAGQQF--E--Q---GRYYATYENISDTSS-----------GNKLRQQNLLGSYDAFLPIGD-----NNTKLFGGATLGLVKLEQDGKG---------------FKRDSDVGYAAGLQAGILQELSKNASIEGGYRYLRTNASTEMTPHGGNKLGSLDLHSSSQFYLGANYKF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2LHF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -12978 for 848 contacts (-15.3/contact) +
2D Compatibility (PS) -15197 + (NN) -4743 + (LL) 4924
1D Compatibility (HY) 400 + (ID) 1100
Total energy: -28694.0 ( -33.84 by residue)
QMean score : 0.120
|
|
|