Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKIGILGAMREEITPILELFGVDFEEIPLGGNVFHKGVYHNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGVAGSLVKDLKINDLLVATQLVQHDVDLSAFDHPLGFIP-ESAIFIETSGSLNALAKKIANEQHIALKEGVIASGDQFVHSKERKEFLVSEFKA-SAVEMEGASVAFVCQKFGVPCCVLRSISDNADEKAGMSFDEFLEKSAHTSAKFLKSMVDEL
4X24 Chain:A ((2-230))
--KIGIIGAMQQEVAILKDLIE-DVQEVNQAGCTFYSGQIQGVDVVLLQSGIGKVSAALGTALLISQYAPDVVINTGSAGGFDASLNVGDVVISSEVRHHDADVTAFGYEIGQMPGQPAAFKADEKLMTVAEQALAQLPNTHAVRGLICTGDAFICTAEGQQFIRQHFPSVVAVEMEASAIAQTCHQFKVPFVVVRAISDVADKESPLSFEEFLPLAAKSSSAMVLKMVELL
General information:
TITO was launched using:
RESULT:
Template:
4X24.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140304 for 2040 contacts (-68.8/contact) +
2D Compatibility (PS) -23635 + (NN) -1609 + (LL) 520
1D Compatibility (HY) -17200 + (ID) 3650
Total energy: -185878.0 ( -91.12 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_4X24.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4X24-query.scw
PDB file :
Tito_Scwrl_4X24.pdb
: